Key Concept: Averages, Range, and Standard Deviation, with A level Biology Past-Paper Questions
You need to know some maths for A level Biology. This includes knowing how to interpret averages (mean, median and mode), ranges, and standard deviations to work out whether an experiment can be said to have shown an effect or not. Master this early on and it will not help you with exam questions, but also make it easier for you to learn the bits of the course that are explained using these statistical methods.
You need to know some maths for A level Biology. This includes knowing how to interpret averages (mean, median and mode), ranges, and standard deviations to work out whether an experiment can be said to have shown an effect or not. Master this early on and it will not help you with exam questions, but also make it easier for you to learn the bits of the course that are explained using these statistical methods.
Why does Biology need so much data?
Maybe the guy at the back is just big for his age?
Researchers often want to compare two or more things. Which species of frog is heavier? Which type of soil grows taller plants? At what temperature do these bacteria divide fastest? At which pH are fish most active?
The biological world is complicated, so multiple, repeated measurements are usually required.
There are three main reasons for taking multiple measurements:
Measurement errors. It’s hard to take measurements in the real world. Even if you re-measure the exact same thing, and even if you use a well-calibrated tool, you might get a slightly different result each time. Maybe you can’t hold the tool still enough, or you can’t read it clearly, or the thing you’re measuring moves. These are precision errors.
Individual variation. If you want to ask a general question about a whole population, eg “do robins sing more than blackbirds” then you need to measure data from more than two individuals. If you only use two, you might randomly pick outliers; maybe you get a particularly perky robin, or a lazy/sick blackbird. Similarly, if you sample a small area of a larger region, you may not pick a representative area.
Uncontrolled variables.There will nearly always be variable-influencing factors that you’re not aware of, or unable to control. Maybe there are changing sounds or smells in the environment, subtle changes in light, or in the birds’ blood-sugar levels. These can affect individual measurements in unpredictable ways.
All of these things can affect the value you record, making any one single measurement unreliable. So researchers normally end up collecting large sets of measurements. In this way they can get a much better idea of what’s really going on.
Why does Biology need Statistical techniques?
Plotting lots of repeated measurements for different datasets on the same graph can create a confusing mess. Also, “the data look different to me” isn’t good enough for science.
Reducing each dataset to just two or three values makes it much easier to compare. In fact, it’s so simple that such data can be understood even without a graph, so values are often presented very simply in a table.
Calculating Averages in Biology
There are three types of average: mean, median, and mode. They all reduce the data set to one single number.
This is useful for comparisons. For example, if you let a frog jump ten times, measuring the length of every jump, you can calculate their average jump length. You can then compare that single number to the average jump length from another frog to find out which jumps further.
Calculating the Mean
The most important type of average for A level Biology is the mean. It’s also what most people are talking about when they say “average” in everyday life.
To find the mean, add up all the numbers, then divide by how many numbers there were. You end up with just one number.
Here’s an example dataset:
| Set 1 |   | 3 | 4 | 5 | 5 | 5 | 6 | 6 | 6 | 7 | 8 |   | total = 55   /   n = 10   /   mean = 5.5 |
| Set 1 |   | 3 | 4 | 5 | 5 | 5 | 6 | 6 | 6 | 7 | 48 |   | total = 95   /   n = 10   /   mean = 9.5 |
| Set 1 |   | 3 | 4 | 5 | 5 | 5 | 6 | 6 | 6 | 7 | 48 |   | central number(s) = 5 and 6   /   median = 5.5 |
| Set 1 |   | 1 | 3 | 5 | 5 | 5 | 5 | 6 | 6 | 7 | 48 |   | mode = 5 |
| Set 1 |   | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 50 |   | mean = 50   /   median = 50   /   mode = 50 |
| Set 2 |   | 25 | 30 | 35 | 40 | 50 | 50 | 60 | 65 | 70 | 75 |   | mean = 50   /   median = 50   /   mode = 50 |
| Set 3 |   | 1 | 2 | 3 | 4 | 50 | 50 | 96 | 97 | 98 | 99 |   | mean = 50   /   median = 50   /   mode = 50 |
The averages are the same! By themselves, averages only tell you one small part of the story.
What is Range / why is it useful
One of the big differences betwen the datasets above is the range of numbers that appear.
The range is the range-of-values that appear, from the lowest to the highest.
| Set 1 |   | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 50 |   | lowest value = 50   /   highest value = 50   /   range = 50 to 50 |
| Set 2 |   | 25 | 30 | 35 | 40 | 45 | 55 | 60 | 65 | 70 | 75 |   | lowest value = 25   /   highest value = 75   /   range = 25 to 75 |
| Set 3 |   | 1 | 2 | 3 | 4 | 50 | 50 | 96 | 97 | 98 | 99 |   | lowest value = 1   /   highest value = 99   /   range = 1 to 99 |
Set 1 has a range of 50 to 50. So you can reasonably predict that the next measurement would likely be 50 too
Set 2 and Set 3 have wider ranges. There are a wider range of possible values that might be measured, so it’s harder to predict what the next measurement might be.
A wide range might indicate that your measurement technique is very unprecise, or that there is a wide natural variation in the thing you are measuring, or that there is another factor affecting your measurements.
But a wide range might also just mean there were one and two weird outliers in the data. So you need to be careful when using this value. Here is a set with one odd measurement, which might be due to a measurement error.
| Set 4 |   | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 50 | 90 |   | lowest value = 50   /   highest value = 90   /   range = 50 to 90 |
| Set 1 |   | 25 | 42 | 48 | 50 | 50 | 50 | 50 | 52 | 58 | 75 |   | values clustered around mean = low standard deviation |
| Set 2 |   | 25 | 30 | 35 | 40 | 45 | 55 | 60 | 65 | 70 | 75 |   | values spread out away from mean = high standard deviation |
To understand Standard Deviation, think about a situation where you have made very many measurements, so that you have multiple measurements at each possible value. Now plot these on a graph (see below). In biology, you usually see that the graph forms a bell shape. This is called a “Normal distribution”.
Normal distributions are symmetrical, so the mean, mode, and median are all the same, appearing at the centre of the graph (mean, median, and mode = 16 in this example). In normal distributions, most measurements are near the average, so there is a peak in the middle of the graph.
(Sometimes, you’ll find a curve is skewed a bit to one side. This separates out the mode, median and mean values. But for our purposes, I’m going to stick to thinking about the symmetrical graph.)
How wide the curve is matters a lot, because it affects how much two sets of data overlap. Compare these two examples below. Both have one set of data where the mean is 14 (plotted in orange), and another set where the mean is 20 (plotted in blue).
There is the same amount of data in both graphs, and the averages haven’t changed. But there is a lot less overlap between the two datasets in the example to the left. The data on the right is a lot more spread out away from the average values.
When datasets overlap a lot, you need to be very careful that you definitely have enough data to be sure their means really are different. If you have a small data set with a lot of variation, then adding extra measurements can make a big difference to the mean.
What is Standard Deviation
Standard Deviation tells you how widely the data is spread out in a normal distribution. Its symbol is sigma, “σ”.
You’re very unlikely to be asked to calculate standard deviation in an exam, and it takes a while to explain so I’m not going to go through it here (don’t worry they’d give you the equation if you did have to do this).
But you do need to know what it tells you.
Here is the basic normal distribution graph again. The graph is symmetrical and the mean (μ) is in the centre.
Now here is the same graph, but two more values are marked on the x-axis, shown by orange lines. These are the value of the mean minus one standard deviation (μ-σ), and the value of the mean plus one standard deviation (μ+σ).
If you colour in the bit of the graph that is within one standard deviation of the mean (from μ-σ to μ+σ), then on any normal distribution, 68.27% of the data points will lie within this area. You don’t need to remember that percentage, but remember it is always the same.
This means that if the standard deviation is a small number, you know most of the data points are close to the mean. This gives you more confidence that the mean is a useful value for comparison.
The graphs below have the same X-axis. Both are normal distributions with the same mean. But the one on the left has a small standard deviation, and the one on the right has a high standard deviation. (Some of the data from the right-hand graph falls outside the values shown on the graph.)
How to tell if there is a significant difference between values using the mean and standard deviation
!! Ok so this is the important bit we’ve been building up to !!
In a normal distribution, most of the data (68.27%) falls within one standard deviation of the mean. This is the area between μ-σ and μ+σ.
To work out whether it’s just chance that the means are different, or whether it’s a real effect, you need to check whether this area overlaps bewteen the two sets of data.
If the areas between μ-σ and μ+σ overlap, the difference is not considered significant.
There are different ways of presenting the data.
Standard Deviations Using Numbers - example
An example:
Set 1: mean (μ) = 50, standard deviation (σ) = 8
Set 2: mean (μ) = 40, standard deviation (σ) = 3
Are these sets of data significantly different? Look at the areas between μ-σ and μ+σ
Set 1: μ-σ = 42 and μ+σ = 58
Set 2: μ-σ = 37 and μ+σ = 43
Do these areas overlap? Yes they do (both include 42-43). So you can not consider the two data sets significantly different.
(Also worth knowing: nearly all the data (95.45%) falls within two standard deviations (between μ-2σ and μ+2σ) - so if these two areas don’t overlap you can be even more sure the two sets of data really are different.)
Standard Deviations Plotted on Graphs - example
On graphs, the mean is plotted as usual, with a dot or column. Extra lines extend out to show the area from μ-σ to μ+σ. This can make it more obvious whether areas overlap or not (unless they are super close in which case numbers are more useful).
Standard Deviation Exam Past Papers
Example Exam Question 5
Question 5 answers found at the bottom of this web page
Understanding Standard Deviations from Graphs
Example Exam Question 6
Question 6 answers found at the bottom of this web page
Example Exam Question 7
Question 7 answers found at the bottom of this web page
Graphs and Tables in A level Biology
If you’re not confident with questions that include graphs and tables, see the recent blog post “How to Approach A level Biology Graph and Table Questions: Tips and Exam Question Pack”, which offers more useful tips for navigating them during exams, and more exam questions to practice with.
Answers to example exam questions
The data for the damaged block should be ignored. The mean for shape C is 3520 seconds
Cinnamon Oil median = 16, mean = 17 ….. and ….. Postive Control median = 12, median = 13
Median = 41. This avoids the outliers affecting the value as would happen if you used the mean. And the sample size is too small to use the mode (there are no repeated values)
The range is 2 to 11
Bull terrier genetic diversity is significantly the smallest of the breeds shown, meaning it the most inbred. Jack Russell genetic diversity is significantly the greatest. The genetic diversity of Miniature terrier and Airedale terriers are similar with no significant difference between the two.
Standard deviation is spread of data around the mean; using standard deviation reduces effect of anomalies/ outliers; standard deviationcan be used to determine if (the difference in results is) significant/not significant/due to chance /not due to chance
Trapping increases enzyme/GOx/HRP activity; the difference/increase is significant (it is unlikely to be due to chance as the standard deviations do not overlap)
Key Concept: Surface Area to Volume ratio (SA:V)
Some concepts turn up again and again in A-level biology. Taking a little time to ensure you really understand these key concepts from the start can save a lot of effort overall.
Surface area to volume ratio (SA:V) is vital for understanding a wide range of topics including transport across cell membranes, gas exchange, digestion, heat exchange, and mass transport. SA:V explains why the inner membrane of a mitochondrion is folded, why elephants have big ears, and why jellyfish don’t need blood vessels.
Some concepts turn up again and again in A-level biology. Taking a little time to ensure you really understand these key concepts from the start can save a lot of effort overall.
Surface area to volume ratio (SA:V) is vital for understanding a wide range of topics including transport across cell membranes, gas exchange, digestion, heat exchange, and mass transport. SA:V explains why the inner membrane of a mitochondrion is folded, why elephants have big ears, and why jellyfish don’t need blood vessels.
How confident are you in calculating this value and understanding its significance?
What are surface-area-to-volume ratios?
"Microvilli-Duodenum" by Wbensmith is licensed under CC BY-SA 3.0.
The ratio tells you about how changing the shape or volume of something affects its surface area. It’s not as simple as many people think: doubling the volume of ice-cream in a choc-ice doesn’t double the area of chocolate needed to cover it.
Surface areas are really important in biology. And so the shapes and volumes of things including organelles, cells, and organs are often optimised with respect to surface area. Whenever you see a weirdly folded or worm-shaped structure, think about SA:V.
Surface area to volume ratio (SA:V) is a value calculated by dividing a thing’s surface area by its volume. It is a single number that tells you about the relationship between the two input values.
To be precise: SA:V tells you how much surface area there is per unit of volume.
How to calculate SA:V (it’s not difficult, you just divide)
Quick maths refresher
You will need to think about length, area, and volume and understand their units. Here’s a reminder for cuboids:
Simple example
Imagine a cube where every edge is 1 cm long. (Note: this blog doesn’t let me write little superscript numbers so I’ll use ^ to indicate that the following number should be written superscript, so 1^2 would mean 1-squared.)
Each square face of the cube has a surface area of 1 cm x 1 cm = 1 cm^2
Cubes have six faces, so the total surface area is 6 x 1 cm^2 = 6 cm^2
The volume of the cube is 1 cm x 1 cm x 1 cm = 1 cm^3
SA:V = surface area / volume. In this example that’s 6 cm^2 / 1 cm^3 = 6 cm^-1
Notice the funny unit there. You’ve divided cm^2 by cm^3 so they don’t cancel out perfectly.
But does it matter what this unit is? Let’s try it using the same cube but measuring it in millimetres.
Each square face of the 1 cm cube has a surface area of 10 mm x 10 mm = 100 mm^2
Cubes have six faces, so the total surface area is 6 x 100 mm^2 = 600 mm^2
The volume of the cube is 10 mm x 10 mm x 10 mm = 1000 mm^3
SA:V = surface area / volume. Using millimetres that’s 600 mm^2 / 1000 mm^3 = 0.6 mm^-1
1 mm is 1/10 of 1 cm and the SA:V calculated in mm is 1/10 that of the value calculated in cm. If you are comparing SA:V values, make sure they have the same unit.
Of course you don’t find a lot of cubes in nature. In exams they might simplify cells or other bodies to be imagined as spheres of a known radius, and give you equations for you to calculate the surface area and volume. And there are much weirder shapes to think about too. But before we get to all that …
How does SA:V change as things increase in scale?
We know the 1 cm cube has a SA:V of 6 cm^-1.
So, what if we get a handful of these 1 cm cubes and stick them together to make a scaled-up cube where every edge is 2 cm long? (See picture). How will the SA:V of this new structure compare? It’s still a cube, after all; it’s just a bit bigger.
2-cm cube:
Each square face of the assembled cube has a surface area of 2 cm x 2 cm = 4 cm^2
Cubes have six faces, so the total surface area is 6 x 4 cm^2 = 24 cm^2
The volume of the assembled cube is 2 cm x 2 cm x 2 cm = 8 cm^3
SA:V = surface area / volume. In this example that’s 24 cm^2 / 8 cm^3 = 3 cm^-1
The larger cube’s SA:V is only half that of the unit cube!
SA:V is surface area divided by volume. Higher values of SA:V mean there is more surface area for each unit of volume, and lower values of SA:V mean there is less surface area for each unit of volume.
So our 2 cm cube has less surface area per unit volume than the 1 cm cube did.
The larger cube has a lower SA:V. And if you work out the numbers for an even bigger one, you’ll get an even lower SA:V.
This makes sense. To build the 2 cm cube, you stack eight 1 cm cubes together. By doing this, you bury some of their faces within the structure. You end up with the same volume as eight individual 1-cm cubes, but you have reduced the surface area that is exposed to the outside world.
Also, if you look carefully at the picture, you’ll see that each cube in the assembled structure has half of its faces buried. So there’s only half the surface area per unit volume compared to the single cube. And so it makes sense that the SA:V is half what it was for the single cube.
Each small cube is only showing three of its six faces. So for each 1 cm^3 volume (ie for each small cube) there is 3 cm^2 surface area exposed, giving us an overall SA:V of 3 cm^-1.
Key concept: as size increases, SA:V decreases. This is a good thing to explicitly state in any question about SA:V and size, where the shape stays the same.
Try it: calculate SA:V for a 3 cm x 3 cm cube. What value do you guess you might get? And what is the actual value?
Why size matters
"Zygote" by Nina Sesina is licensed under CC BY-SA 4.0.
Imagine you are a single cell (well, you were once, don’t you remember?).
Your cell membrane is your connection with the outside world. Through it you take in nutrients, water and other necessary things. And you expel your waste through it.
This membrane is your surface; you have as much surface area as you have cell membrane.
Meanwhile, inside the cell membrane you have cytoplasm, organelles, etc. In this region you are busily metabolising molecules. You can measure this region as your volume.
Question: can you take in enough nutrients, and expel enough waste, to keep up with your metabolism?
More-important question: if you grow bigger, will this still be true?
Valonia ventricosa aka Sailors eyeball - a single cell that can grow up to 5 cm in diameter. But … how???
As a cell grows larger its SA:V falls. This is just like we saw with scaling up the cubes above. The growth of the cell’s surface area (cell membrane) just can’t keep up with the growth of its volume (where the metabolism is). This means there will be a point at which there just isn’t enough cell membrane (surface area) to transport everything that needs to be transported, limiting the cells ability to function.
This is one reason why cells tend to be pretty small!
But … wait a minute, what about the freakish cell in this next photo? A shiny, bright green, single-celled alga that can get up to 5 cm in diameter. A single cell! Charmingly known as ‘sailors’ eyeballs’.
But how can one cell possibly be so large? Isn’t its SA:V ridiculously low? (Spoiler: yes it is). How can it transport everything it needs with such a low SA:V? Well, it has a trick …
Shape matters
This giant cell is cheating. Inside, all the metabolic activity is limited to an area very close to its cell membrane. Nearly all of the cell’s interior is filled up by one giant vacuole that pushes all the interesting stuff out to the region next to the membrane. So there isn’t nearly as much metabolism going on in there as you might imagine from its total volume. If you re-calculated its SA:V ignoring the volume inside its vacuole, you’d get a much more sensible number. (It also has multiple nuclei spread throughout its cytoplasm.)
In exams, questions are usually about solid spheres or cuboids. We’ve looked at cuboids, so let’s look at spheres.
Spheres
If you have to calculate for spheres, they will give you the equations you need to calculate volume and surface area. So don’t worry about remembering these.
Volume of a sphere = 4/3 x π x r^3
Surface area of a sphere = 4 x π x r^2
So, if you have a sphere of radius 1 cm (remember this is just the distance from the centre to the outside, so the whole thing is 2 cm across):
The surface area is 4 x π x r^2. If r = 1, r^2 = 1. So the surface area is 4 x 3.14 x 1 = 12.6 cm^2
The volume is 4/3 x π x r^3. If r = 1, r^3 = 1. So the volume is 4/3 x 3.14 x 1 = 4.19 cm^3
SA:V = surface area / volume. In this example that’s 12.6 cm^2 / 4.19 cm^3 = 3 cm^-1
This is the same SA:V as the 2-cm cube!
That important phrase “as size increases, SA:V decreases”, is talking about increasing the size of something while keeping the same shape overall. Shape is also really important!
Spheres have the lowest possible surface area for their volume. This is one of the reasons that nature likes them. For example, bubbles are spheres because surface tension pulls their surface in to minimise its area.
Stretching out
If a cell needs to grow to large dimensions but also needs to keep a high SA:V, it needs to avoid being a sphere. More-complex shapes will always have higher SA:V.
Consider neurons. You have a single neuron that reaches from your big toe to your spine. A single cell over a metre long! But these neurons are definitely not spheres. They are very skinny.
Question: what happens to SA:V when you make long/thin shapes?
Let’s go back to the 1 cm cubes. The 1 cm cube had a SA:V of 6. And the 2 cm cube had a SA:V of 3.
The 2 cm cube had a volume of 8 cm^3 : it was made out of eight small cubes. Let’s take those eight small cubes and rearrange them into the shape of a flatworm: a rectangular block of 2 cm x 4 cm x 1 cm (see picture above).
The upper and lower faces of this shape each have a surface area of 8 cm^2
The two long sides of this shape each have a surface area of 4 cm^2
The two ends of this shape each have a surface area of 2 cm^2
The total surface area is (2 x 8 cm^2) + (2 x 4 cm^2) + (2 x 2 cm^2) = 28 cm^2 (the 2 cm cube had 24 cm^2)
The volume of the assembled cube is 2 cm x 4 cm x 1 cm = 8 cm^3 (ok that isn’t a surprise)
SA:V = surface area / volume. In this example that’s 28 cm^2 / 8 cm^3 = 3.5 cm^-1 (the 2 cm cube was 3 cm^-1)
Rearranging it from a 2 cm cube to a flatworm of the same volume has increased its SA:V.
Ok so let’s push it even further and turn it into a long worm.
The upper and lower faces of this shape each have a surface area of 8 cm^2
The two long sides of this shape each have a surface area of 8 cm^2
The two ends of this shape each have a surface area of 1 cm^2
The total surface area is (2 x 8 cm^2) + (2 x 8 cm^2) + (2 x 1 cm^2) = 34 cm^2
The volume of the assembled cube is 1 cm x 8 cm x 1 cm = 8 cm^3 (no surprise)
SA:V = surface area / volume. In this example that’s 28 cm^2 / 8 cm^3 = 4.25 cm^-1 (the 2 cm cube was 3 cm^-1)
Your neurons can be really, really long because they’re also skinny, because that means they still have a really high SA:V.
And of course this works for whole animals too. Many small animals lack blood vessels and rely on molecules simply diffusing through their bodies. They need high surface area for transport and they also need every part of their interior to be not-to-far from that surface. This is (one of) the reasons we don’t have truly-giant insects: they are limited by their ability fo transport things to/from the outside world. Sponges and jellyfish also lack blood vessels and rely on diffusion.
Nemotode by Bob Goldstein, UNC Chapel Hill http://bio.unc.edu/people/faculty/goldstein/ Licenced under a Creative Commons Attribution-Share Alike 3.0 Unported licene
Tardigrade by Alexander Klepnev licenced under CC BY-SA 4.0.
Humans, alongside other larger animals, have much lower SA:V and suffer from low diffusion rates. So we need specialised structures to aid exchange and transport.
Maximising SA:V
Structures that are involved in transport and exchange rely upon having very high surface areas of membrane across which transport can take place. To maximise exposed surface area, structures are folded, or shaped into fingers, or branches.
In the human body, you find extremely high SA:V ratio in specialised structures including:
Gut - the gut wall has microvilli, finger-like structures that extend into the lumen. These increase surface area for absorption of water and nutrients
Lungs - the lungs have many branches terminating in tiny alveoli offering a very high surface area for gas exchange.
Capillaries - capillaries have much higher SA:V than arteries or veins. This offers a higher surface area for transporting things between the blood and tissue fluids. It also increases fluid resistance, which is important to keep the blood moving forward.
Red blood cells have a biconcave shape that increases their SA:V allowing better gas exchange with the blood plasma.
In other organisms, the shapes of structures like leaves, chloroplasts, gills, root hairs, and fungal hyphae, among many other examples, are similarly optimised to maximise surface area to volume ratios.
Folded membranes
You also find folded membranes used as a way to squeeze a load of membrane into a small space. Eg:
Mitochondria have a highly folded inner membrane that offers more surface area to embed the enzymes and proteins involved in oxidative phosphorylation, so that more ATP can be produced.
Golgi apparatus and endoplasmic reticulum are similarly folded to maximise their surface area.
Thermoregulation
Who is is feeling cold, and who is feeling hot?
Body surfaces also exchange heat with the environment.
We naturally change our SA:V when we get hot or cold by changing the position of our limbs and body. Which of the people in the image has the highest SA:V? Which person is feeling cold, and which is feeling hot?
Dogs increase their surface area by opening their mouths when hot and panting (passing air over their wet surfaces to lose heat through evaporation). Cats form neat loafs when cold but sprawl dramatically across the floor when hot.
Organisms’ entire body shape will also be related to their thermoregulatory needs.
Animals that need to lose heat from their bodies usually have a higher SA:V, and animals that need to conserve heat usually have a lower SA:V. This is why elephants have such huge ears (more surface area from which to lose heat) and why animals from cold environments tend to be more spherical than those from hot climates.
"Emperor Penguins" by Christopher.Michel is licensed under CC BY 2.0.
"Black Necked Stork" by AntoGros is licensed under CC BY 2.0.
Keep it in mind
If you can get an intuitive feeling for Surface Area to Volume ratios, and keep them in mind whenever you see a question about folded structures, or about similar shapes of different sizes, then this will help you understand what questions are really asking. A level Biology is about the why and how much more than it is about remembering facts, and SA:V goes a long way to help you understand things on this deeper level.
This article was written by Dr Jenny Shipway with guidance from Tom Whitburn
Overview: Gaining and Losing Atoms from the Human Body
Many topics in A level biology relate to how the human body gains and loses atoms. But have you ever stepped back and thought of how these processes all fit together? Having a wide overview can help make sense of individual topics.
Many topics in A level biology relate to how the human body gains and loses atoms. But have you ever stepped back and thought of how these processes all fit together? Having a wide overview can help make sense of individual topics.
Atoms in, atoms out
Your body is an atom-organising machine, with biochemical processes moving atoms between different molecules and locations. Your body takes new atoms in from the environment, and it releases atoms back into the environment.
A surprisingly large amount of mass is exchanged with the environment every day. About 98% of the atoms in your body are replaced each year - a startling thought. This article is focussed on the processes that result in the biggest mass changes.
Atoms gained and lost by the body usually exist as part of molecules.
Taking atoms/molecules into the tissues from the environment = absorption
Sending useful atoms/molecules out into the environment (or bloodstream) = secretion
Sending waste atoms/molecules out into the environment = excretion
Most of the mass we exchange with the environment is in the form of water. Remember that water is a important substrate/product in many metabolic and catabolic biochemical reactions; it’s not just a solvent.
Keeping it under control
Our bodies must control what molecules can (and cannot) get in from (and out to) the environment. Most of our bodies are covered with skin for this reason - skin acts as a barrier between us and our environment. We have specialised organs that manage absorption: the lungs and the gut. These organs both create spaces where molecules from the outside environment are put for absorption to take place in a controlled way. We also have specialised organs that control what substances leave our bodies.
Quick check: remember that molecules don’t count as being inside our bodies until they have been absorbed into our tissues. Just breathing or swallowing something isn’t enough. For example, the gut is a tube that goes from mouth to anus. It goes through our bodies, but the space inside the gut (the lumen, where the food is digested) is not part of our bodies any more than the hole in a doughnut is part of the doughnut. Imagine passing a tiny pebble through the hole in a doughnut; the pebble doesn’t go into the doughnut, just through it; it’s the same with us. Similarly if you swallowed the pebble it would pass through your gut but not be absorbed through the gut wall into your body.
Absorption - gaining body mass
The most common atoms we gain from the molecules we absorb are: carbon (C), oxygen (O), hydrogen (H) and nitrogen (N). This makes sense as these are the atoms most frequently found in biological molecules. We get these from:
The gut
absorption from the gut varies a lot, especially depending on what you eat and drink. These are rough averages:
About 7 litres of water per day (O, H) from fluids that were secreted higher up the gut
About 2-3 litres of water per day (O, H) from food and drink
Maybe something like 500 g total of other food molecules, comprised of:
carbohydrates (C, O, H)
fats (C, O, H)
proteins (C, O, H, N, S)
much smaller masses of other ions and molecules, with all the atoms we need to live
A lot of the water we ingest (eat/drink) comes from our food - you don’t need to drink litres of water every day. Any food that isn’t hard, dry and crunchy will contain water. Consider: a healthy diet includes a lot of plant and animal cells, and cells are about 70-80% water; a piece of steak contains a lot more water than protein, even after cooking.
The lungs
absorb gas from the air:
Something like 750 g per day of oxygen, as the molecular gas O2 (O)
Just look at that daily body mass increase we get just from absorbing oxygen gas!! You take in more mass from the air than from carbohydrates, fats and proteins combined. And it’ll be even higher if you excercise. It’s kinda wild tbh. This oxygen is required for respiration and ends up in water molecules (not in CO2!).
How do we use this stuff?
Although I’ve been talking about atoms, we nearly always absorb molecules. Even Oxygen is absorbed as the molecular gas O2.
And this is really important - having ready-made molecules is vital. Unlike plants, we can’t make glucose through photosynthesis, nor synthesise the amino group of amino acids from scratch*. So we need to absorb these molecules ready-made.
Some of these absorbed molecules are immediately useful (eg glucose for respiration, amino acids for protein synthesis), while many provide really useful starting places for biochemical processes that synthesise other useful molecules, often making use of the absorbed molecules’ ready-made carbon backbones.
Excretion - losing body mass
Excretion is the deliberate loss from the body of waste products from metabolism. It’s about getting rid of unneeded/dangerous waste. This is part of homeostasis.
We excrete the same sort of mix of atoms as we absorb, but in different molecular forms, which are no longer useful to us and/or which may be unhealthy for us to retain in our bodies. We can lose kilograms of mass this way, every day.
Again there are specialised organs/processes for this, the main ones being:
The lungs
Excrete something like 730 g per day of carbon dioxide, a waste product of cellular respiration (C, O)
This comprises 530 grams of carbon atoms and 200 grams of oxygen atoms
This is the main way we lose carbon atoms from our bodies!
Important: these oxygen atoms are not the same ones that were absorbed by the lungs (those ones became water)
The liver
Excretes somewhere around 900 g per day of bile fluids into the gut lumen.
Bile fluids are mostly water (H, O), which can be reabsorbed.
Contains a small mass (mg) of broken-down haem proteins (C, O, H, N), bile salts, and other substances that need to be excreted.
Also contains a very small mass of substances to aid digestion (but these are being secreted, not excreted).
Note: the liver breaks down unwanted proteins to form urea … but it does not excrete urea! The urea it produces is released into the blood to be excreted by the kidney. (Fun question: why doesn’t the liver just excrete this urea directly into the gut?)
The kidney
Excretes about 25 g per day of urea (C, O, H, N), which must be dissolved in water for excretion.
Excretes excess water, in volumes that can vary from zero to litres per day (H, O).
Excretes excess salts, averaging somewhere around 5 g per day.
The skin
Excretes a highly variable volume of sweat, depending on conditions.
Sweat is almost entirely water (H, O) but contains a very small mass of excreted salts, minerals and other substances.
A small amount of urea is also excreted in sweat (C, O, H, N).
You might be surprised not to see faeces listed here. Some things are excreted into the gut and become part of our faeces, but only in small amounts. Most of the bulk of our faeces is undigested food and bacteria that live in our gut - things that were never inside our bodies in the first place, are not products of our metabolism, and so which don’t count as excretions (no matter what everyday language might suggest). In scientific language, the loss of faeces from the body is egestion (compare with ingestion for eating).
Warning: remember all these numbers will vary wildly between different people and under different conditions. For example: if you exercise then you will excrete more carbon dioxide, and if you eat a lot of protein you will excrete more urea. The numbers given here are just to give you a very rough idea of the relative amounts involved.
What about secretions?
While excretion is the release of waste, secretion is the release of useful molecules (into the blood or external environment). Secretions that are sent into the external environment (including into the gut lumen) may be lost if not reabsorbed.
The gut receives about 6 litres per day of liquid secretions, but much of the water is reabsorbed
On a normal day, you might secrete about half a litre of sweat
These secretions are largely water. They do contain other things, like digestive enzymes and salts, but the total mass is of these are small compared to the excretions described above and so they aren’t so important for the big-picture story we’re telling here.
Water gain and loss
Remember water is not just a solvent, it’s a common substrate and product of biochemical processes. And we don’t only get it from absorption through our gut.
About 300 ml of water per day is produced as a product of metabolism (from respiration, as mentioned above).
It’s worth mentioning that we also lose quite a lot of water just because of the way our bodies work. But this is not considered excretion. Again all these figures vary a lot depending on the individual and their level of activity:
About 300 grams of water per day is lost through unavoidable evaporation from the wet surfaces of our lungs
About 300 grams of water per day is lost by evaporation from the skin (this is not sweat, it’s just evaporation)
About 500 grams of water per day is lost because it is required to dissolve urea for excretion (this is a bit different from the kidney’s ability to also excrete excess water in addition to this.
Finally, be aware that some water that enters our gut is never absorbed at all. This is important to keep the gut contents nice and squidgy so they can be pushed along to the anus to be egested. About 200 grams of water per day is lost in this way
* you might be confused by me saying this as people do talk about amino acid synthesis in humans. However, when we synthesise them we do so by using the amino group from an existing amino acid, usually glutamate. We can’t make the amino group ourselves, we can only swap it from molecules that have been synthesised by plants.
Key Concept: Independent and Dependent Variables
A variable is any value that does/might change during an experiment. Variables can include things like pH, temperature, colour, or the concentration of substances. The amount of time that has passed is a variable, as are rates of reaction.
A guest blog from Dr Jenny Shipway, who studied biochemistry at university and now works in science communication and education training.
To understand experimental design and graphs in exam questions, you will need to confidently recognise the difference between different types of variables. Master this now and it will also make it easier to learn content that is taught using graphs.
What is a Variable
A variable is any value that does/might change during an experiment.
Variables can include things like pH, temperature, colour, or the concentration of substances. The amount of time that has passed is a variable, as are rates of reaction.
Some variables’ values are fixed deliberately by the scientist.
Some variables’ values are changed deliberately by the scientist. These changes are planned in advance so the measured values are usually known before the experiment starts.
Other variables’ values are allowed to change naturally as the experiment progresses. These values can be measured to provide useful data.
Simplify Your Exam Approach
During exams it’s very easy to get overwhelmed with information. When this happens, your brain makes guesses and jumps, often without you being aware. This is why students so often mis-read graphs and/or make ‘silly’ mistakes.
Excellent Exam Tip: work out what the experiment was and how the graph is presented BEFORE looking at the exam question.
This will …
Reduce the number of things you’re thinking about at one time
Reduce the risk of you jumping to (incorrect) conclusions
Help you focus on understanding the experiment
You might feel an urge to rush forward to look at the question, but trust me that won’t save time. You will not be able to answer the questions unless you understand the graph, and rushing forward will make that more difficult, not less.
Identifying Variables
Variables described in the experiment and named on the graph axes may include:
Independent Variable – this is the thing that is changed deliberately by the scientist in a planned way. This is the thing that we expect to cause a measurable effect.
Dependent Variable- this is the thing that is measured by the scientist. The value is not known until it is measured, and the value will depend upon the value of the independent variable.
Control Variables – these variables are fixed to one unchanging value throughout. For example, all experiments might be carried out at 20°C, in which case temperature is a control variable. (Important: this is a different thing from ‘a control’).
The purpose of the experiment is to answer the question: how does the independent variable affect the dependent variable?
There are usually many factors that could be affecting the dependent variable, so it’s important to control as many variables as possile. The idea is that if only one thing has changed (ie the independent variable), then you can be more confident the affect is due to that one thing.
An Example 🍅🍅🍅
If you wanted to work out what temperature was best for growing tomatoes, you could try growing plants at different temperatures to see which plant produced the most fruit. Everything except temperature should be kept the same so that you’re sure that any difference in fruit yield is due to temperature.
The question is: how does temperature affect fruit yield?
You will deliberately be changing the temperature to pre-chosen values, so temperature is the independent variable.
You will need to measure the weight of tomatoes produced to find out this value. So this is the dependent variable. The weight of fruit will depend upon the temperature.
Check your Understanding
Can you identify the independent and dependent variables in the following examples? Which variable was independently fixed by the scientist? And which was measured/recorded during the experiment?
(Ignore the positions of the data points, you only need to look at the axis labels.)
Usually, you will find the independent variable along the x-axis, and the dependent variable up the y-axis. But that’s not always the case (as you hopefully spotted in some of these examples). Do not let your brain jump to an assumption! You must always check this.
You need to be 100% confident of your variables before you move forward to look at the actual question, or everything else will get really confusing. It’s a good tip to write on the exam paper which variable is which (eg label the graph axes “I.V.” and “D.V.”)
Multiple Independent Variables
It’s possible to have more than one independent variable.
For example, some experiments are run twice under different conditions. See this graph:
First, look at the axes. The independent variable here is the amount of time that has passed (on the x-axis): the scientist decided before the experiment at what times they would count the fruit. The dependent variable is the number of ripe fruit (on the y-axis): the number of ripe fruit is the thing the scientist is measuring, and this depends on how much time has passed when the measurement is taken. We’ve seen this before.
Now look at the data. There are two sets of data plotted on the graph. One experiment has been run with fertiliser, and one without. So the presence of fertiliser is another independent variable – it’s something else that affects the value of the dependent variable.
Example A-level Exam Questions
Can you identify the independent and dependent variables in the following A level Biology exam questions?
If this post has been helpful, please like ❤️ below and share with your friends.
For more general information about graphs, see the post about how best to approach A level biology graph questions.
OCR A and OCR B June 2019 - Summer highlights - Great tips from the board
OCR A June 2019 summer highlights
Practising recall is so important for retention and learning. Try this quiz without books first !
Try this quiz - if you found it useful then please ❤️ (at the bottom of the page) and share, you can follow me on instagram - alevelbiologytutor
Tuesday night group tutoring topics and Y13 & Y12 OCR A and AQA small group information
You can subscribe monthly to over 60 hours of recorded lessons
Repeatable or reproducible ? Valid or accurate ? Glossary of vocabulary
A great glossary of vocabulary that applies to Biology questions and answers.
A great glossary of terms that apply to A level Biology questions and answers. Learn them and use them !
Nightmare essay ......
Nightmare essays …..
This beauty came up in June 2017…… Read it and be grateful that it probably won’t be asked again !
Please like and share (and click on a advert to help with the hosting costs !)
Xylem and Transpiration Question - How would you answer this one ?
Pre-U synoptic exam question - Xylem and transpiration. Transport of Water in Plants
Muscles, Calcium, mitosis and potency - Try this excellent synoptic question
Outstanding synoptic question on muscles and contraction. Excellent practise
- if you use then please like and share
Challenging Questions with lots of Data Analysis and Application - A-level Biology past paper questions
Good practice if you are struggling with data analysis questions
Pack of challenging past paper questions with lots of Data Analysis and application - A-level Biology past paper questions - good for OCR and AQA specifications
Have a go at some of these - markschemes at the end
Please "like" and share with your friends if you find that this helped your improve your understanding
Respiration and Enzymes/Protein structure ... Hard Synoptic A-level Biology Question
This is an outstanding synoptic question from a Pre-U Biology Paper. Covers Protein Synthesis, Enzymes, Heart Disease, Respiration ....
Leaf discs in a Syringe - Another Synoptic Question #alevelbiology
Photosynthesis, Enzymes, Pigments, Leaf Buoyancy and more experimental design.
Think about how starch is made and what it is made from ......
Please like and share
Photosynthesis, Enzymes, Pigments, Leaf Buoyancy and more experimental design.
Think about how starch is made and what it is made from .......
Here is the question as a pdf
and here is the markscheme
Respiration Photosynthesis and AS knowledge - a terrific synoptic A-level Biology question
One from the OCR Unifying concepts paper, combines respiration and photosynthesis.
(a) think photolysis and Oxygen accepting electrons ...
(b) is about phosphorylation and diffusion gradients
(c) is about the nature of passive transport and using proteins
(d) is about endosymbionts and prokaryotes
Please like and share
One from the OCR Unifying concepts paper, combines respiration and photosynthesis.
(a) think photolysis and Oxygen accepting electrons ...
(b) is about phosphorylation and diffusion gradients
(c) is about the nature of passive transport and using proteins
(d) is about endosymbionts and prokaryotes
Vaccines, Plasmids and Monkeys... More Synoptic Questions - A-level Biology #ocr #eduqas
From an Old OCR Unifying concepts paper. ....
Don't panic, the question is not about DNA vaccines or plasmids.
The question is about differences between protein and DNA structure, protein synthesis, post translational modification of protein, clonal selection, mutation of pathogens. All of which are on the specification.
From an Old OCR Unifying concepts paper. ....
Don't panic, the question is not about DNA vaccines or plasmids.
The question is about differences between protein and DNA structure, protein synthesis, post translational modification of protein, clonal selection, mutation of pathogens. All of which are on the specification.
Read the scaffolding of the question with great care

